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movie.py

#A* -------------------------------------------------------------------
#B* This file contains source code for the PyMOL computer program
#C* copyright 1998-2000 by Warren Lyford Delano of DeLano Scientific. 
#D* -------------------------------------------------------------------
#E* It is unlawful to modify or remove this copyright notice.
#F* -------------------------------------------------------------------
#G* Please see the accompanying LICENSE file for further information. 
#H* -------------------------------------------------------------------
#I* Additional authors of this source file include:
#-* Peter Haebel, Byron DeLaBarre
#-* 
#-*
#Z* -------------------------------------------------------------------

import cmd
import glob
import math
import string

def sweep(pause=0,cycles=1):
   pause = int(pause)
   cycles = int(cycles)
   n_state = cmd.count_states("all")
   if pause>0:
      pass_string = "1 x%d 1 -%d %d x%d %d -1"%(pause, n_state, n_state, pause, n_state)
   else:
      pass_string = "1 -%d %d -1"%(n_state, n_state)
   movie_list = [ pass_string ] * cycles
   movie_string = string.join(movie_list," ")
   cmd.mset(movie_string)

def pause(pause=15,cycles=1):
   pause = int(pause)
   cycles = int(cycles)
   n_state = cmd.count_states("all")
   if pause>0:
      pass_string = "1 x%d 1 -%d %d x%d"%(pause, n_state, n_state, pause)
   else:
      pass_string = "1 -%d %d -1"%(n_state, n_state)
   movie_list = [ pass_string ] * cycles
   movie_string = string.join(movie_list," ")
   cmd.mset(movie_string)
            
def load(*args,**kw):
   nam = "mov"
   if len(args)>1:
      nam = args[1]
   fils = glob.glob(args[0])
   fils.sort()
   if not len(fils):
      print "Error: no matching files"
   else:
      for a in fils:
         apply(cmd.load,(a,nam),kw)
#         cmd.load(a,nam)

def rock(first,last,angle=30,phase=0,loop=1,axis='y'):
   first=int(first)
   last=int(last)
   angle=float(angle)
   phase=float(phase)
   loop=int(loop)
   nstep = (last-first)+1
   if nstep<0:
      nstep = 1
   if loop:
      subdiv = nstep
   else:
      subdiv = nstep+1
   ang_cur = math.pi*phase/180
   ang_inc = 2*math.pi/subdiv
   ang_cur = ang_cur - ang_inc
   a = 0
   while a<nstep:
      last = angle*math.sin(ang_cur)/2
      ang_cur = ang_cur + ang_inc
      disp = angle*math.sin(ang_cur)/2
      diff = disp-last
      # com = "mdo %d:turn %s,%8.3f" % (first+a,axis,diff)
      # cmd.do(com)
      cmd.mdo("%d"%(first+a),"turn %s,%8.3f"% (axis,diff))      
      a = a + 1

def roll(first,last,loop=1,axis='y'):
   first=int(first)
   last=int(last)
   loop=int(loop)
   n = last - first
   if loop:
      step = 2*math.pi/(n+1)
   else:
      step = 2*math.pi/n   
   a = 0
   deg = (180*step/math.pi)
   while a<=n:
      # com = "mdo %d:turn %s,%8.3f" % (first+a,axis,deg)
      # cmd.do(com)
      cmd.mdo("%d" % (first+a), "turn %s,%8.3f" % (axis,deg))
      a = a + 1

def tdroll(first,rangex,rangey,rangez,skip=1):
   '''
AUTHOR

   Byron DeLaBarre

USAGE

   movie.tdroll(rangx,rangey,rangez,skip=1,mset=0)
   
   rangex/y/z = rotation range on respective axis
   enter 0 for no rotation.

   skip is angle increment in each frame
   
   Use skip to reduce final movie size or to speed up rotation.
   
EXAMPLE

   movie.tdroll 360,360,360,5
   
'''
   first = int(first)
   rangex = float(rangex)
   rangey = float(rangey)
   rangez = float(rangez)
   skip = int(skip)
   axis=['x','y','z']
   rangel=[rangex,rangey,rangez]
   axpos=0
   frpos=1
   for ax in axis:
      range = int(rangel[axpos])
      if range:
         leftover = divmod(range,skip)
         print leftover[1]
         if leftover[1]:
           range = range + int(leftover[1])
         a = 0
         while a<range:
            cmd.mdo("%d" % (first+frpos-1), "turn %s,%8.3f" % (ax,skip))
            a = a + skip
            frpos = frpos + 1
         axpos = axpos + 1
      else:
         axpos = axpos + 1
   print (" tdroll: defined rotations for", frpos - 1,
          "frames, starting at frame %d"%first)

def zoom(first,last,step=1,loop=1,axis='z'):
   # Author: Peter Haebel
   first=int(first)
   last=int(last)
   step=int(step)
   loop=int(loop)
   n = last - first
   a = 0
   while a<=n:
      if (loop and a>n/2):
         s = -step
      else:
         s = step
      # com = "mdo %d:move %s,%8.3f" % (first+a,axis,s)
      # cmd.do(com)
      cmd.mdo("%d" % (first+a),"move %s,%8.3f" % (axis,s))
      a = a + 1

def nutate(first,last,angle=30,phase=0,loop=1,shift=math.pi/2.0,factor=0.01):
   first=int(first)
   last=int(last)
   angle=float(angle)
   phase=float(phase)
   loop=int(loop)
   nstep = (last-first)+1
   if nstep<0:
      nstep = 1
   if loop:
      subdiv = nstep
   else:
      subdiv = nstep+1
   ang_cur = math.pi*phase/180
   ang_inc = 2*math.pi/subdiv
   ang_cur = ang_cur - ang_inc
   a = 0
   while a<nstep:
      lastx = angle*math.sin(ang_cur)/2
      lasty = angle*math.sin(ang_cur+shift)/2
      ang_cur = ang_cur + ang_inc
      nextx = angle*math.sin(ang_cur)/2
      nexty = angle*math.sin(ang_cur+shift)/2      
      # com = "mdo %d:turn %s,%8.3f" % (first+a,axis,diff)
      # cmd.do(com)
      cmd.mdo("%d"%(first+a),"turn x,%8.3f;turn y,%8.3f;turn y,%8.3f;turn x,%8.3f"%
              (-lastx,-lasty,nexty,nextx))
      a = a + 1

def screw(first,last,step=1,angle=30,phase=0,loop=1,axis='y'):
   # Author: Peter Haebel
   first=int(first)
   last=int(last)
   step=int(step)
   angle=float(angle)
   phase=float(phase)
   loop=int(loop)
   nstep = (last-first)+1
   if nstep<0:
      nstep = 1
   if loop:
      subdiv = nstep
   else:
      subdiv = nstep+1
   ang_cur = math.pi*phase/180
   ang_inc = 2*math.pi/subdiv
   ang_cur = ang_cur - ang_inc
   a = 0
   while a<nstep:
      if (loop and a>=nstep/2):
         s = -step
      else:
         s = step
      last = angle*math.sin(ang_cur)/2
      ang_cur = ang_cur + ang_inc
      disp = angle*math.sin(ang_cur)/2
      diff = disp-last
      # com = "mdo %d:turn %s,%8.3f; move z,%8.3f" % (first+a,axis,diff,s)
      # cmd.do(com)
      cmd.mdo("%d" % (first+a), "turn %s,%8.3f; move z,%8.3f" % (axis,diff,s))
      a = a + 1

      

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