Logo Search packages:      
Sourcecode: pymol version File versions  Download package

Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
_CAtomInfo
_CButMode
_CCGORenderer
_CCharacter
_CColor
_CControl
_CCoordSetUpdateThreadInfo
_CDeferred
_CEditor
_CExecutive
_CFeedback
_CFont
_CGO
_CIsosurf
_CMain
_CMovie
_CObject
_CObjectUpdateThreadInfo
_COrtho
_CP_inst
_CPop
_CPyMOL
_CPyMOLOptions
_CRay
_CRayAntiThreadInfo
_CRayHashThreadInfo
_CRayThreadInfo
_CScene
_CSculptCache
_CSeeker
_CSelector
_CSeq
_CSetting
_CSettingUnique
_CShaderMgr
_CShaderPrg
_CSphere
_CTetsurf
_CText
_CTexture
_CTracker
_CUtil
_CVFont
_CWizard
_CWord
_CWordMatcher
chempy.dictdb._DictDBServer
web.examples.justhttpd._HTTPRequestHandler
_OVContext
_OVHeapArray
_OVLexicon
_OVOneToAny
_OVOneToOne
_OVRandom
_PyMOLGlobals
web.pymolhttpd._PymolHTTPRequestHandler
syncmol._PyMOLReader
syncmol._PyMOLRequestHandler
pmg_tk.skins.normal.builder.ActionWizardAction-directing Wizards
ActiveRec
afp
pmg_tk.skins.normal.builder.AminoAcidFrame
pmg_tk.skins.normal.builder.AminoAcidWizard
pymol.wizard.annotation.Annotation
pmg_tk.startup.apbs_tools.APBSTools2### PluginCode ### ###
pymol.wizard.appearance.Appearance
chempy.arc.ARC
TNT::Array1D< T >
TNT::Array2D< T >
TNT::Array3D< T >
ATLCall
chempy.Atom
pmg_tk.skins.normal.builder.AtomFlagWizard
pmg_tk.skins.normal.builder.AtomFrame
AtomInfoType
pmg_tk.skins.normal.builder.AttachWizard
avsfield_t
chempy.models.Base
pymol.headering.baseHeader
basis_atom_t
BasisCallRec
pymol.wizard.benchmark.Benchmark
bgfdata
binposhandle
biomocca_t
make_simple.BlankObject
Block
BlockRect
chempy.Bond
BondType
pmg_tk.skins.normal.builder.BondWizard
pymol.wizard.box.Box
chempy.brick.Brick
brix_t
pmg_tk.skins.normal.builder.Builder
pymol::callback::Callback
cardata
pymol.opengl.gl.CarefulFunction
CBasis
chempy.cc1.CC1
CChamp
ccp4_t
CCrystal
cePoint
chempy.cex.CEXchild
chempy.cex.CEXprop
pymol.m4x.CEXpyParser
chempy.cex.CEXroot
chempy.cex.CEXsmilesError
chempy.cex.CEXsmilesParser
chempy.cex.CEXstream
CExtrude
Cfeedback_
CField
CFontGLUT
CFontType
chempy.champ.Champ
CharData
CharFngrprnt
pymol.wizard.charge.Charge
pmg_tk.skins.normal.builder.ChargeWizard
CharInfo
CharRec
CharUnion
pmg_tk.skins.normal.builder.ChemFrame
JAMA::Cholesky< Real >
chempy.cif.CIF
pymol.headering.CIFHeader
chempy.cif.CIFRec
pymol.computing.CleanJob
pymol.wizard.cleanup.Cleanup
pmg_tk.skins.normal.builder.CleanWizard
click_ordered_list.Clicker
link_demo.Clickurl
CMatch
pymol2.cmd2.Cmd
pymol.CmdException
CMeasureInfo
CMethod
CMovieModal
pymol.headering.CNSHeader
CObjectState
ColorectionRec
pmg_tk.ColorEditor.ColorEdit
pmg_tk.ColorEditor.ColorEditor
pmg_tk.skins.normal.ColorMap.ColorMap
pmg_tk::skins::normal::ColorRampModel::ColorPoint
pymol.colorramping.ColorPoint
pmg_tk.skins.normal.ColorRampModel.ColorRamp
pymol.colorramping.ColorRamp
pmg_tk.skins.normal.ColorRampModel.ColorRampController
pmg_tk.skins.normal.ColorRampModel.ColorRampView
ColorRec
pmg_tk.skins.normal.ColorRampModel.ColorTypes
pymol.colorramping.ColorTypes
complex
chempy.models.Connected
CoordSet
cordata
CountCall
CPixmap
cpmddata
CPopUp
CPrimitive
CQueue
CRaw
crddata
CScrollBar
CSculpt
CSeqCol
CSeqHandler
CSeqRow
CShaker
CSymmetry
cube_box
cube_t
CView
CViewElem
CWordList
CWordMatchOptions
datasource_t
dcdhandle
DebugRec
DeferredImage
DeferredMouse
DeferredRay
pymol.wizard.demo.Demo
pmg_tk.skins.demo.Demo
pymol.wizard.demo.DemoInfo
pymol.wizard.stereodemo.DemoInfo
pymol.wizard.density.Density
chempy.dictdb.DictDBClient
chempy.dictdb.DictDBInfo
chempy.dictdb.DictDBLocal
chempy.dictdb.DictDBRequestHandler
chempy.dictdb.DictDBServer
pymol.wizard.distance.Distance
DistSet
dlpolydata
doublecomplex
pymol.wizard.dragging.Dragging
dsn6_t
desres::molfile::DtrReader
desres::molfile::DtrWriter
dx_t
EdgeRec
pmg_tk.skins.normal.builder.EditFrame
pmg_tk.skins.normal.builder.EditorFrame
edm_t
JAMA::Eigenvalue< Real >
pymol.embed.EmbeddedPyMOL
pymol.embed.epymol.ePyMOL
pymol.opengl.gl.Error
EvalElem
ExecutiveObjectOffset
ExecutiveRMSInfo
Export
ExportCoords
ExportDotsObj
ExtensionClassCAPIstruct
ExtRec
chempy.fast.FastModel
pymol.constants.fb_action
pymol.constants.fb_mask
pymol.constants.fb_module
pymol.wizard.fedora.Fedora
pmg_tk.startup.remote_pdb_load.FetchPDB
pmg_tk.startup.apbs_tools.FileDialogButtonClassFactory
pymol.wizard.filter.Filter
fio_iovec
FitVertexRec
pmg_tk.skins.normal.builder.FixAtomWizard
FontGLUTBitmapCharRec
FontGLUTBitmapFontRec
TNT::Fortran_Array1D< T >
TNT::Fortran_Array2D< T >
TNT::Fortran_Array3D< T >
pmg_tk.skins.normal.builder.FragmentFrame
desres::molfile::FrameSetReader
fs4_t
G3dPrimitive
GadgetSet
gamessdata
gaussiandata
pymol.invocation.generic
gluCallbackObject
gluQuadricObject
chempy.gms.GMS
gmxdata
graphics_list
grasp_tPlugin data handle
GRASSPGrasp structure
grd_t
grid_t
GridInfo
gridmap_t
pmg_tk.skins.normal.builder.GuiButton
pmg_tk.skins.normal.builder.GuiFrame
pmg_tk.skins.normal.builder.GuiImgButton
pmg_tk.skins.normal.builder.GuiLabel
pmg_tk.skins.normal.builder.GuiRadiobutton
handle_t
hash_node_t
hash_t
HBondCriteria
pmg_tk.skins.normal.builder.HydrogenWizard
TNT::i_refvec< T >
IdtfMaterial
IdtfResourceMesh
ImageType
chempy.models.Indexed
pmg_tk.skins.normal.builder.InvertWizard
Isofield
jshandle
desres::molfile::key_record
pymol.wizard.label.Label
LabPosType
lex_entry
LinkType
List
ListAtom
ListBond
ListElem
ListInt
ListInt2
ListInt3
ListInt4
ListInt5
ListMatch
ListMember
ListPat
ListScope
ListTarg
ListTmpl
pymol.constants.loadable
chempy.lst.LST
JAMA::LU< Real >
M4XAlignType
M4XAnnoType
M4XBondType
M4XContextType
pymol.embed.wxpymol.MainWindow
chempy::map::Map
MapCache
MapType
match_info
MatchNode
TNT::Matrix< T >
md_atom
md_box
md_file
md_header
md_ts
mdfdata
pymol.wizard.measurement.Measurement
MemberType
pymol.wizard.message.Message
mmcifdata
chempy.mmd.MMD
pmg_tk.skins.normal.ModalWindow.ModalWindow
pmg_tk.skins.normal.builder.ModifyFrame
chempy.mol.MOL
chempy.mol2.MOL2
mol2data
moldendata
chempy.Molecule
molfile_atom_t
molfile_graphics_t
molfile_metadata_t
molfile_plugin_t
molfile_qm_basis_t
molfile_qm_hessian_t
molfile_qm_metadata_t
molfile_qm_sysinfo_t
molfile_qm_t
molfile_qm_timestep_metadata
molfile_qm_timestep_t
molfile_qm_wavefunction_t
molfile_timestep_metadata
molfile_timestep_t
molfile_volumetric_t
mrc_t
msms_t
pymol.headering.MTZHeader
Multipick
pymol.wizard.mutagenesis.Mutagenesis
pmg_wx.MyApp
pymol.embed.wxpymol.MyApp
gl01.myCallback
gl02.myCallback
gl03.myCallback
pymol.embed.wxpymol.MyCanvasBase
pmg_wx.MyFrame
tkwindow.myTkWindow
namdbinhandle
chempy.neighbor.Neighbor
pymol.parser.NestLayer
pmg_tk.ColorEditor.NewColor
pmg_tk.skins.normal.NormalClass askfileopenfilter(askopenfilename): """ Subclasses open file dialog to include filename filtering """ def __init__(self, initialdir = initdir, filetypes=ftypes, multiple=1): super(askfileopen, self).__init__( initialdir, filetypes, multiple=multiple)
ObjectAlignment
ObjectAlignmentState
ObjectCallback
ObjectCallbackState
ObjectCGO
ObjectCGOState
ObjectDist
ObjectGadget
ObjectGadgetRamp
ObjectGroup
ObjectMap
ObjectMapDesc
ObjectMapState
ObjectMesh
ObjectMeshState
ObjectMolecule
ObjectMoleculeBPRec
ObjectMoleculeOpRec
ObjectSlice
ObjectSliceState
ObjectSurface
ObjectSurfaceState
ObjectVolume
ObjectVolumeState
ObjMolMultiplexType
ObjMolPairwise
ObjRec
ObservedInfo
OtherRec
ov__object
OVreturn_size
OVreturn_word
OVstatus
pymol.wizard.pair_fit.Pair_fit
PanelRec
chempy.tinker.amber.Parameters
parm
parmdata
pymol.parser.Parser
pbeq_t
chempy.pdb.PDB
pdbdata
PDBInfoRec
PDBScale
phi_t
Pickable
PickContext
Picking
sele_wiz.PickWizard
pick_wiz.PickWizard
chempy.pkl.PKL
web.examples.justhttpd.PlainHttpd
plt_t
pmg_tk.PMGApp.PMGApp
pmg_tk::skins::PMGSkin
pmg_tk.startup.apbs_tools.PmwExistingFileDialog
pmg_tk.startup.apbs_tools.PmwFileDialog
PointLinkType
PointType
pqrdata
prim_t
ProcPDBRec
pmg_tk.skins.normal.builder.ProteinFrame
pymol.wizard.pseudoatom.Pseudoatom
chempy.PseudoFile
psfdata
PyECMethodObject
PyExtensionClass
pymol2.PyMOL
pymol.embed.wxpymol.PyMOLCanvas
webgui01.PymolHandler
webgui02.PymolHandler
web.pymolhttpd.PymolHttpd
syncmol.PyMOLReader
PyMOLreturn_float
PyMOLreturn_float_array
PyMOLreturn_int
PyMOLreturn_int_array
PyMOLreturn_status
PyMOLreturn_string_array
PyMOLreturn_value
syncmol.PyMOLWriter
PyPureMixinObject
qm_atom_t
qm_timestep_t
qm_wavefunction_t
JAMA::QR< Real >
pymol.commanding.QueueFile
pymol.parsing.QuietException
RayInfo
RefPosType
pmg_tk.skins.normal.builder.RemoveWizard
pymol.wizard.renaming.Renaming
RenderInfo
pymol.cgo.RenderReader
Rep
RepAngle
RepCartoon
RepCylBond
RepDihedral
RepDistDash
RepDistLabel
RepDot
pmg_tk.skins.normal.builder.RepeatableActionWizard
RepEllipsoid
RepLabel
pmg_tk.skins.normal.builder.ReplaceWizard
RepMesh
RepNonbonded
RepNonbondedSphere
RepRibbon
RepSphere
RepSurface
RepWireBond
pmg_tk.skins.normal.builder.RestAtomWizard
rstdata
webgui02.SafeDict
SavedThreadRec
SceneElem
SceneUnitContext
pymol.Scratch_Storage
SculptCacheEntry
pymol.wizard.sculpting.Sculpting
pmg_tk.skins.normal.builder.SculptWizard
chempy.sdf.SDF
chempy.sdf.SDFRec
pmg_tk.skins.normal.builder.SecStructFrame
pymol.wizard.security.Security
SelAtomTag
SelectionInfoRec
pymol.Session_Storage
pmg_tk.SetEditor.SetEditor
pmg_tk.Setting.Setting
pymol.setting.SettingIndex
SettingRec
SettingUniqueEntry
ShakerDistCon
ShakerLineCon
ShakerPlanCon
ShakerPyraCon
ShakerTorsCon
shell_t
pymol.shortcut.Shortcut
pmg_tk.skins.normal.SimpleColorChooser.SimpleColorChooser
pmg_tk.skins.normal.volume.SimpleColorChooser
situs_t
SolventDot
TNT::Sparse_Matrix_CompRow< T >
SpecRec
SphereRec
spider_t
SSEntry
SSResi
chempy.gamess1.State
chempy.bmin.state.State
chempy.tinker.state.State
pymol.wizard.stereodemo.Stereodemo
desres::molfile::StkReader
stl_t
TNT::Stopwatch
chempy.Storage
StrBlock
chempy.tinker.amber.Subset
SurfaceJob
SurfaceJobAtomInfo
JAMA::SVD< Real >
T_ConvCType
T_DiscrGr
T_DoubleArray
T_EqMIx
T_HallTr
T_HM_as_Hall
T_IntArray
T_LTr
T_Main_HM_Dict
T_NormAddlG
T_RMxI
T_RTMx
T_SgOps
T_Short_Mono_HM_Dict
T_ssVM
TableRec
texture_info
tinkerdata
pymol.wizard.toggle.Toggle
chempy.tinker.amber.Topology
TrackerInfo
TrackerIter
TrackerMember
TriangleSurfaceRec
TriangleType
trx_hdr
uhbd_t
pmg_tk.skins.normal.builder.UnbondWizard
up_element
pmg_tk.startup.apbs_tools.util
pmg_tk.skins.normal.builder.ValenceWizard
vasp_plugindata_t
TNT::Vector< T >
VectorHash
VectorHashElem
VFontRec
pmg_tk.startup.apbs_tools.VisualizationGroup## PmwGroups ## ##
VLARec
VMDDIR
vmdplugin_t
pmg_tk.skins.normal.volume.Volume
pmg_tk.skins.normal.hist.VolumeHist
vtf_data
WalkDepthRec
pymol.wizard.Wizard
WizardLine
WordKeyValue
xbgfdata
xsf_box
xsf_t
chempy.xyz.XYZ
xyzdata

Generated by  Doxygen 1.6.0   Back to index